3.28. Metagenome shotgun
- Dataset category
Phenome
- Summary
Microbiome analysis data of fecal samples (shotgun analysis)
- Samples analyzed
fecal sample
- Number of samples
315 samples
- Analysis platform
NovaSeq 6000 (Illumina)
- item ID rule
Each microbe in the Metagenome shotgun 2022 dataset is assigned an ID such as TTCx_1234. The leading TT stands for ToMMo Taxonomy. The C in the ID’s third character indicates that it belongs to the Metagenome shotgun dataset. (This character is used to distinguish it from the ID for the Metagenome 16S-v4 and Metagenome 16S-v3/v4 datasets.) The fourth character indicates the hierarchical level in the phylogenetic tree. (TTCP_xxxx = Phylum, TTCC_xxxx = Class, TTCO_xxxx = Order, TTCF_xxxx = Family, TTCG_xxxx = Genus, TTCS_xxxx = Species)
- Related pages on jMorp website